CDS

Accession Number TCMCG057C24470
gbkey CDS
Protein Id XP_018489500.1
Location join(11754000..11754044,11754429..11754505,11754571..11754655,11754753..11754825,11754911..11755008,11755137..11755229,11755313..11755386,11755470..11755508,11755611..11755699,11755803..11755879,11755975..11756049,11756171..11756218,11756310..11756393,11756482..11756569,11756653..11756731,11756801..11756894,11756978..11757056,11757161..11757276,11757362..11757439)
Gene LOC108860084
GeneID 108860084
Organism Raphanus sativus

Protein

Length 496aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018633998.1
Definition PREDICTED: gamma-aminobutyrate transaminase POP2, mitochondrial isoform X2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category E
Description Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
KEGG_TC -
KEGG_Module M00027        [VIEW IN KEGG]
KEGG_Reaction R10178        [VIEW IN KEGG]
KEGG_rclass RC00008        [VIEW IN KEGG]
RC00062        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K16871        [VIEW IN KEGG]
EC 2.6.1.96        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00250        [VIEW IN KEGG]
ko00650        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01120        [VIEW IN KEGG]
map00250        [VIEW IN KEGG]
map00650        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01120        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000902        [VIEW IN EMBL-EBI]
GO:0000904        [VIEW IN EMBL-EBI]
GO:0001505        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003867        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005774        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005975        [VIEW IN EMBL-EBI]
GO:0005984        [VIEW IN EMBL-EBI]
GO:0005985        [VIEW IN EMBL-EBI]
GO:0006020        [VIEW IN EMBL-EBI]
GO:0006066        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006105        [VIEW IN EMBL-EBI]
GO:0006520        [VIEW IN EMBL-EBI]
GO:0006536        [VIEW IN EMBL-EBI]
GO:0006538        [VIEW IN EMBL-EBI]
GO:0006540        [VIEW IN EMBL-EBI]
GO:0006541        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006935        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0006979        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007155        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008270        [VIEW IN EMBL-EBI]
GO:0008483        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009063        [VIEW IN EMBL-EBI]
GO:0009064        [VIEW IN EMBL-EBI]
GO:0009065        [VIEW IN EMBL-EBI]
GO:0009311        [VIEW IN EMBL-EBI]
GO:0009448        [VIEW IN EMBL-EBI]
GO:0009450        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009651        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009826        [VIEW IN EMBL-EBI]
GO:0009856        [VIEW IN EMBL-EBI]
GO:0009860        [VIEW IN EMBL-EBI]
GO:0009865        [VIEW IN EMBL-EBI]
GO:0009875        [VIEW IN EMBL-EBI]
GO:0009932        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010038        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010183        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016049        [VIEW IN EMBL-EBI]
GO:0016054        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016769        [VIEW IN EMBL-EBI]
GO:0017144        [VIEW IN EMBL-EBI]
GO:0019482        [VIEW IN EMBL-EBI]
GO:0019484        [VIEW IN EMBL-EBI]
GO:0019751        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022610        [VIEW IN EMBL-EBI]
GO:0022622        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0032989        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0040011        [VIEW IN EMBL-EBI]
GO:0042133        [VIEW IN EMBL-EBI]
GO:0042135        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042330        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043169        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043648        [VIEW IN EMBL-EBI]
GO:0043649        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044262        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044282        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044437        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044703        [VIEW IN EMBL-EBI]
GO:0044706        [VIEW IN EMBL-EBI]
GO:0046395        [VIEW IN EMBL-EBI]
GO:0046686        [VIEW IN EMBL-EBI]
GO:0046872        [VIEW IN EMBL-EBI]
GO:0046914        [VIEW IN EMBL-EBI]
GO:0048364        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048468        [VIEW IN EMBL-EBI]
GO:0048588        [VIEW IN EMBL-EBI]
GO:0048589        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048868        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0050897        [VIEW IN EMBL-EBI]
GO:0050918        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0060560        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0072329        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098609        [VIEW IN EMBL-EBI]
GO:0098740        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901605        [VIEW IN EMBL-EBI]
GO:1901606        [VIEW IN EMBL-EBI]
GO:1901615        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCAGTGGTCAACAGCCTCCGACGATTGGCGCGCACTACCCAGAGCAGGTATGCTGTTTCTTCCAAATACATGCCTGGCTCGAGAATCTTCACTACAGAAGCATCACCAGACAAGCTTGGGTCTAAAGGGCATGATATGCTAGCTCCTTTTACAGCTGGGTGGCAGAGTGCTGATTTAGATCCTCTGATCATTGCCAAATCCGAGGGGAGTTATGTGTATGATGACCATGGCAAGAAGTATCTTGATTCTCTCGCTGGTCTATGGTGTACAGCCTTAGGAGGAAATGAGCCACGTCTTGTTTCTGCTGCGGTAGGGCAGCTGGACACCTTGCCGTTTTACCACTCCTTTTGGAACCGTACTACTAAACCATCTCTGGATCTTGCTAAGGATCTTATAGAGATGTTCACTGCCAAGAAAATGGCCAAAGCTTTTTTTACAAACAGTGGATCAGAAGCCAATGATACACAGGTCAAGCTGGTTTGGTATTACAATAACGCACTTGGAAGGCCTGAGAAGAAGAAATTTATCGCGAGAAAGAAATCGTACCATGGCTCCACTTTAATATCAGCAAGTTTGTCCGGTCTCCCAGCGCTGCATCAAAACTTTGATTTACCTGCACCGTTTGTGTTGCACACAGATTGCCCTCATTACTGGCGTTTTCATCTTCCAGGGGAAACGGAAGAGGAGTTCTCAACCAGATTAGCCAAGAATTTAGAGGATCTTATCATTAAAGAGGGACCAGAAACTATTGGTGCTTTTATCGCTGAACCAGTAATGGGTGCTGGTGGTGTGATACCTCCACCTGCTACTTACTTTGAAAAGATTCAAGCTGTTGTTAAGAAGTATGATATCCTGTTCATTGCTGATGAGGTGATTTGTGCATTTGGAAGACTTGGGACAATGTTTGGCTGTGATAAATACAACATCAAGCCAGATCTTGTGTCCTTAGCCAAGGCACTATCCTCAGCGTACATGCCAATTGGAGCCATTCTTATGAGTCAAGAAGTAGCAGATGTCATATATTCTCAAAGCAACAAGCTAGGTGCTTTCTCCCATGGATTTACTTACTCTGGTCATCCAGTTTCATGTGCTGTAGCAATTGAAGCGTTAAAGATATACAAAGAGAGGAACATACCAGAACATGTCGCCAGAGTTGCCCCAAGGTTTCAAGATGGTCTTAAAGCTTTTGCCAAGAGTAGTCCTATTATTGGAGAGATAAGAGGAACGGGTTTAATTCTGGGGACTGAGTTTACAGACAACAAATCTCCAAACGAACTGTTTCCACCAGAATGGGGTGTTGGCGCATATTTTGGAGCCGAGTGCCAGAAGCGTGGTATGCTAGTCCGTGTTGCAGGTGATGGCATTATGATGTCTCCACCGCTCATTATCTCACCTGAAGAGATCGACGAGTTGATTGATATCTACGGGAAGGCATTGAAAGCTACGGAAGAGAGGGTAAAAGAACTCAAGGCTCAACACAAGAAGTGA
Protein:  
MAVVNSLRRLARTTQSRYAVSSKYMPGSRIFTTEASPDKLGSKGHDMLAPFTAGWQSADLDPLIIAKSEGSYVYDDHGKKYLDSLAGLWCTALGGNEPRLVSAAVGQLDTLPFYHSFWNRTTKPSLDLAKDLIEMFTAKKMAKAFFTNSGSEANDTQVKLVWYYNNALGRPEKKKFIARKKSYHGSTLISASLSGLPALHQNFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLAKNLEDLIIKEGPETIGAFIAEPVMGAGGVIPPPATYFEKIQAVVKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVSLAKALSSAYMPIGAILMSQEVADVIYSQSNKLGAFSHGFTYSGHPVSCAVAIEALKIYKERNIPEHVARVAPRFQDGLKAFAKSSPIIGEIRGTGLILGTEFTDNKSPNELFPPEWGVGAYFGAECQKRGMLVRVAGDGIMMSPPLIISPEEIDELIDIYGKALKATEERVKELKAQHKK